NAM_phasedImputed_1cM_AllZeaGBSv2.3_allChrs.zip
NAM_imputed_AllZea_GBS_Build_July_2012_FINAL.zip NAM_BPEC_AllZea_GBS_Build_July_2012_FINAL.zip Furthermore, cleaned up, phased, and fully imputed genotypes are available for NAM and the teosinte/W22 backcross family. However, the public data are more highly curated, as they are split into germplasm sets of interest, including NAM, IBM, the Maize282 association panel, and a teosinte/W22 backcross family. SNP filtering was less stringent compared to v2.7, so the additional SNPs are more "noisy". This somewhat older GBS build consists of 2,219,843 SNP genotypes for 32,736 public and private taxa. Links to instructions of using iCommand and Cyberduck is at the bottom of this page.
When using the software for downloading, you will need CyVerse data store file paths to locate the files. If you do not have an account already, please register at CyVerse (iPlant) account. You will need to login as a CyVerse (iPlant) user in order to see the data files. Please use iCommands (Linux) or Cyberduck (Windows and Mac) software to download files, not through CyVerse/iPlant web pages. The Panzea website uses CyVerse Data Store to distribute large data files.
0 kommentar(er)
